Daemon Power

The NetBSD Packages Collection: biology

You are now in the directory "biology".

Software for the biological sciences

Here are the one-line descriptions for each of the 25 items in this directory:


arka-0.11nb1: Graphic interface for the programs from the GP package
azara-2.7nb2: Programs to process and view NMR data
bioperl-0.7.0nb3: Perl tools for computational molecular biology
chemtool-1.6.12: Program for drawing organic molecules
clustalw-1.83: General purpose multiple alignment program for DNA or proteins
coalesce-1.5.0.2: Estimates effective population size and mutation rate
fastDNAml-1.2.2: Program derived from Joseph Felsenstein's version 3.3 DNAML
fluctuate-1.4: Estimation of population growth rate
genesplicer-20030403: Computational Method for Splice Site Prediction
glimmer-2.13: System for finding genes in microbial DNA
gp-0.26: Manipulate DNA/RNA sequence in a Unix fashion
hmmer-2.3.2: Implementation of profile HMM software for protein sequence analysis
lucy-1.18p: Sequence Cleanup Program
mopac-7.0: Molecular energy calculation program
mummer-3.20: System for aligning whole genome sequences
nut-14.4: Record what you eat and analyze your meals
pdbalign-20030812: Prediction of Protein Secondary Structure and Active Sites
phylip-3.61nb3: Phylogeny Inference Package
profit-2.2: Performs least squares fits of two protein structures
puzzle-5.1nb1: Maximum likelihood analysis of molecular sequence data
py25-mol-0.98nb4: Molecular Visualization System
rasmol-2.7.3nb2: Molecular Graphics Visualisation Tool
sewer-2.6nb1: SEquence Analysis using WEb Resources
stride-20030804: Protein secondary structure assignment from atomic coordinates
xylem-1.8.7: Tools for manipulation of genetic databases


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